CDS

Accession Number TCMCG009C19649
gbkey CDS
Protein Id XP_030478730.1
Location complement(join(53219837..53220016,53220256..53220371,53220740..53220763,53220865..53220896,53221271..53221356,53221443..53221496,53221830..53221891,53221996..53222057,53222293..53222379,53222510..53222586,53222680..53222738,53222809..53222873,53222981..53223070,53223193..53223289,53223515..53223614,53223691..53223764,53224294..53224375,53224449..53224499,53224746..53224823,53225049..53225093,53225205..53225306,53225420..53225476,53225863..53225949,53226239..53226296,53226381..53226412,53226493..53226520,53226595..53226696,53226803..53226957,53227347..53227410,53227683..53227755,53227822..53227902,53228024..53228118,53228467..53228498,53229131..53229166))
Gene LOC115695791
GeneID 115695791
Organism Cannabis sativa

Protein

Length 840aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030622870.1
Definition DNA mismatch repair protein MSH5 isoform X1 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAATCGATGAAACCGAAGCTGTTCCTCAGGTGTACATGGCATGCATTCAACATGGCTATCGAGTTGGATTATCTTATTATGATTCGAGTATTCGGCAGCTTAATGTTCTGGAAGTCTGGGAAGATGGCAATAATGACTTTCCACTGATTGATTTGATAAAATATCAAGCTAAGCCTCTGATCATCTACTCAAGCAGTAAAAGTGAAGAATCCCTCTTGTCTGCTTTACAGCGAAGTGATGGAATAAATGAGACTCCCATGGTGAAACTTGTGAAAAGTTCTACATTCAGTTATGAGCAAGCATGGCACAGATTAATATACCTTCGTGTAACTGGAATGGATGATGGGCTAAACATCAAGGAGAGGATTTGTTATTTGAGTTCTATGATGGATATGGGAAGTGATATTCAAGTTCGTGCAAGTGGGGGTCTTCTTGCCATATTAGAAAATGAAAGGATTGTAGATACTCTAGAGCAAAAGGAATGTGGGAATGCATCTATTACTATAGATTCTGTTGTCCAAATTTCATTAAACAACTTTCTCAAACTTGATGCTGCTGCTCACGAGGCATTGCAGATATTCCAAACAGACAAGCATCCAAGCCATATGGGCATTGGAAGAGCTAAAGAGGGGTTCTCTGTGTTTGGCATGATGAATAAGTGTGTAACACCAGCAGGGAGACGCCTCTTGAGAAACTGGTTTTTGAGGCCAATACTAGACTTCGACAATTTGAACAGCCGTCTCAATGGTATATCATTCTTTTTGTCTTCTGAAGAGCTGATGCTTTCCTTACGCGAAACTCTAAAGTCCGTAAAGGACATTCCTCACATACTCAAGAAATTCAACTCTCCAAGCTCCATATGTGCAATTGCTGATTGGACTGCTTTTTTGAAGAGTGTTTGCTCGCTGTTGCATGTGAACAAGATATTTGAAGTAGGCATTTCTGAGAGTCTTCAAGAGCATGCAAATTACTTGAGTTTGGATATTATTGGCAAGGCTAGTTCAAGCATTACAACGGAGCTTGCCTATGTCTATGAATTAGTAATCGGTGTTCTTGATGTTACTAGAAGTAAACAGAAGGGTTACGAGACAATAGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTGAGACAAATATACGAAGAATTGCCAGAGTTTCTGGAAGAGGTGACATCGGTGGAACTTGCAAGATTCCCTCAGCTGTGTAAAAGCAACCTTGCTCCTCGTATTGTTTATATCAACCAGATAGGATACTTGCTGTGCATATTGGAAGAACAAATTGATGAAATTACTCTAGAGAAAATTCAAGATTTTGTGTTTGCTTTTTCTGATGTGGATGGGGAAACTAAAAGATTCTTTTATCGTACCCCAAAGACACAAGAATTGGATAACCTGCTTGGAGATATTTATCACAAAATACTAGACATGGAAAGGGCAATTATTAGAGATTTGGTGTCACATATACTAATCTTCTCAACACATCTGCATAAGGCTGTGAATTTTACTGCTGAACTTGATTGCTTGTTATCACTGGCACTGGTTGCTCGTCAGAACAATTATGTAAGGCCTACTTTGACAGAAGAGAACTTACTTGATATACAAAATGGAAGACATGTTTTGCAGGAAATGACAGTAGATACTTTTATTCCCAATGACACAAAGATTCAAAATGAAGGGAGAATAAATATTATCACTGGTCCTAATTATTCAGGGAAAAGCATCTACATAAAACAGGTAGCTTTAATTGTTTTCCTTTCGCACATTGGAAGCTATGTACCGGCAGAGGCTGCTACCGTGGGGTTAACTGATAGAATATTTTGTGCCATGGGAAGCAAACTTATGACTGCAGAGCAGTCAACGTTTATGATTGATTTGCATCAAGTAGGAACAATGCTAAGGCAGGCAAACTCGCGATCATTGTGTTTATTGGATGAATTTGGAAAAGGTACTCTTACAGAAGATGGCATTGGTTTGCTTGGCGGAACTATAAGTCACTTTGTCTCATTCGACGAACCCCCAAAGGTTCTGGTGTGCACTCATTTGACTGAGTTATTTGATGAGAATTGCTTATCAAAATCTGAGAAAATCAAATTTTACACCATGAGTGTGCTTAGATCTGACAATAACTCAACAGATACTGATGATATTGTATTTCTATATCGGCTAGTTCCTGGTTATGCGCTTCTTAGCTATGGCCTGCACTGTGCTCAACTTGCTGGCGTCCCAGAGGAAGTTATTAAGAGGGCAGCATCTTTGTTGGAATCTATTGGAGAAAATAAGCATGTTGAGCGATTGTGTAATGAGAGTATATCAGCCCAAGATCAAATATACATGACTTTATATTCTTTAGACACTTTTTCTTCTCGTTCAAGACATCTTTTTGGCAAGGAATCTGTGATTCGGTTTGCAAAAGAGCCGTACGTAATTTTGAACATCCCAAGCGGAGATGAACACACGGGCAGGTTTTACTTTTGTCTTTTTCTGTTATTGTGGGTGACATTATACAAAGCTTGA
Protein:  
MEEIDETEAVPQVYMACIQHGYRVGLSYYDSSIRQLNVLEVWEDGNNDFPLIDLIKYQAKPLIIYSSSKSEESLLSALQRSDGINETPMVKLVKSSTFSYEQAWHRLIYLRVTGMDDGLNIKERICYLSSMMDMGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDSVVQISLNNFLKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPAGRRLLRNWFLRPILDFDNLNSRLNGISFFLSSEELMLSLRETLKSVKDIPHILKKFNSPSSICAIADWTAFLKSVCSLLHVNKIFEVGISESLQEHANYLSLDIIGKASSSITTELAYVYELVIGVLDVTRSKQKGYETIVKEGFCDELDELRQIYEELPEFLEEVTSVELARFPQLCKSNLAPRIVYINQIGYLLCILEEQIDEITLEKIQDFVFAFSDVDGETKRFFYRTPKTQELDNLLGDIYHKILDMERAIIRDLVSHILIFSTHLHKAVNFTAELDCLLSLALVARQNNYVRPTLTEENLLDIQNGRHVLQEMTVDTFIPNDTKIQNEGRINIITGPNYSGKSIYIKQVALIVFLSHIGSYVPAEAATVGLTDRIFCAMGSKLMTAEQSTFMIDLHQVGTMLRQANSRSLCLLDEFGKGTLTEDGIGLLGGTISHFVSFDEPPKVLVCTHLTELFDENCLSKSEKIKFYTMSVLRSDNNSTDTDDIVFLYRLVPGYALLSYGLHCAQLAGVPEEVIKRAASLLESIGENKHVERLCNESISAQDQIYMTLYSLDTFSSRSRHLFGKESVIRFAKEPYVILNIPSGDEHTGRFYFCLFLLLWVTLYKA